Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein | SAMEA3472147_00595 | Not Available | Positive | 660746 - 660919 | 6646.44 |
| putative cytoplasmic protein | SAMEA3472147_00596 | Not Available | Positive | 661005 - 661238 | 8800.41 |
| inner membrane protein | SAMEA3472147_00597 | Not Available | Negative | 661239 - 661688 | 15838.1 |
| acetyltransferase ynca | SAMEA3472147_00598 | Not Available | Negative | 661685 - 662203 | 19291.8 |
| putative zinc-binding dehydrogenase | SAMEA3472147_00599 | Not Available | Positive | 662384 - 663421 | 37594.0 |
| gntr family transcriptional regulator | SAMEA3472147_00600 | Not Available | Positive | 663619 - 664284 | 25044.9 |
| tonb-dependent receptor | SAMEA3472147_00601 | Not Available | Negative | 664320 - 666422 | 77295.0 |
| putative receptor | SAMEA3472147_00602 | Not Available | Positive | 666664 - 667725 | 38658.2 |
| l-asparagine permease | SAMEA3472147_00603 | Not Available | Negative | 667838 - 669337 | 54236.3 |
| putative glutathione s-transferase | SAMEA3472147_00604 | Not Available | Positive | 669604 - 670221 | 23307.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





