Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Helix-turn-helix domain-containing protein | SAMEA3472147_02682 | Not Available | Positive | 2801371 - 2803122 | 66770.2 |
| Pbsx family portal protein | SAMEA3472147_02683 | Not Available | Positive | 2803247 - 2804158 | 34177.0 |
| putative transmembrane protein | SAMEA3472147_02684 | Not Available | Positive | 2804689 - 2805219 | 20162.5 |
| Hypothetical protein | SAMEA3472147_02685 | Not Available | Negative | 2805310 - 2805693 | 14211.8 |
| Chromosome partitioning protein | SAMEA3472147_02686 | Not Available | Negative | 2805757 - 2806068 | 11306.5 |
| Plasmid segregation protein parm | SAMEA3472147_02687 | Not Available | Negative | 2806073 - 2807032 | 34938.7 |
| Replication protein | SAMEA3472147_02688 | Not Available | Negative | 2807109 - 2809949 | 108370.0 |
| uncharacterised protein | SAMEA3472147_02689 | Not Available | Negative | 2809946 - 2810335 | 14722.3 |
| Hypothetical protein | SAMEA3472147_02690 | Not Available | Negative | 2810444 - 2810662 | 8348.03 |
| Hypothetical protein | SAMEA3472147_02691 | Not Available | Negative | 2810659 - 2810862 | 7944.49 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





