Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative rna-binding protein | SAMEA3472147_00563 | Not Available | Negative | 629695 - 629907 | 7389.95 |
| 5,10-methylene-tetrahydrofolate dehydrogenase | SAMEA3472147_00564 | Not Available | Negative | 629909 - 630775 | 30957.5 |
| fimbrial-like protein | SAMEA3472147_00565 | Not Available | Positive | 631246 - 631788 | 18475.5 |
| conserved sam-binding protein, duf218 family | SAMEA3472147_00566 | Not Available | Positive | 632346 - 633146 | 29810.5 |
| aldehyde dehydrogenase a | SAMEA3472147_00567 | Not Available | Positive | 633343 - 634782 | 52229.7 |
| glyceraldehyde-3-phosphate dehydrogenase | SAMEA3472147_00568 | Not Available | Negative | 634824 - 635825 | 35750.7 |
| cytochrome b561 | SAMEA3472147_00569 | Not Available | Positive | 636014 - 636544 | 20287.7 |
| uncharacterised protein | SAMEA3472147_00571 | Not Available | Positive | 636789 - 636962 | 5782.12 |
| methyl-accepting chemotaxis protein iii (ribose an galactose chemoreceptor protein) | SAMEA3472147_00573 | Not Available | Positive | 637574 - 639214 | 58886.3 |
| transcriptional regulator | SAMEA3472147_00574 | Not Available | Negative | 639252 - 640175 | 33375.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





