Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fdra protein | SAMEA3472147_00553 | Not Available | Positive | 619770 - 621437 | 58485.2 |
| putative cytoplasmic protein | SAMEA3472147_00554 | Not Available | Positive | 621447 - 622706 | 44974.7 |
| putative carboxylase | SAMEA3472147_00555 | Not Available | Positive | 622717 - 623532 | 29598.8 |
| carbamate kinase | SAMEA3472147_00556 | Not Available | Positive | 623529 - 624422 | 31658.2 |
| phosphoribosylaminoimidazole carboxylase atpase subunit | SAMEA3472147_00557 | Not Available | Negative | 624561 - 625628 | 39556.4 |
| phosphoribosylaminoimidazole carboxylase catalytic subunit | SAMEA3472147_00558 | Not Available | Negative | 625625 - 626134 | 17782.3 |
| udp-2,3-diacylglucosamine hydrolase | SAMEA3472147_00559 | Not Available | Negative | 626252 - 626974 | 26895.7 |
| peptidyl-prolyl cis-trans isomerase b | SAMEA3472147_00560 | Not Available | Negative | 626977 - 627471 | 18168.5 |
| cysteinyl-trna synthetase | SAMEA3472147_00561 | Not Available | Positive | 627645 - 629030 | 52245.0 |
| putative membrane-bound metal-dependent hydrolase | SAMEA3472147_00562 | Not Available | Negative | 629066 - 629587 | 19503.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





