Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxylate carboligase (tartronate-semialdehyde synthase) | SAMEA3472147_00542 | Not Available | Positive | 607106 - 608887 | 64735.5 |
| hydroxypyruvate isomerase | SAMEA3472147_00543 | Not Available | Positive | 608900 - 609676 | 29370.1 |
| 2-hydroxy-3-oxopropionate reductase | SAMEA3472147_00544 | Not Available | Positive | 609776 - 610654 | 30812.5 |
| putative allantoin permease | SAMEA3472147_00545 | Not Available | Positive | 610823 - 612277 | 52449.2 |
| allantoinase | SAMEA3472147_00546 | Not Available | Positive | 612337 - 613698 | 49588.4 |
| putative permease | SAMEA3472147_00547 | Not Available | Positive | 613755 - 615056 | 47242.2 |
| glycerate kinase ii | SAMEA3472147_00548 | Not Available | Positive | 615078 - 616223 | 38835.1 |
| putative glyoxylate utilization | SAMEA3472147_00550 | Not Available | Negative | 616351 - 617136 | 28718.0 |
| allantoate amidohydrolase | SAMEA3472147_00551 | Not Available | Negative | 617147 - 618382 | 45611.4 |
| ureidoglycolate dehydrogenase | SAMEA3472147_00552 | Not Available | Negative | 618404 - 619453 | 37907.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





