Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal resistance protein | SAMEA3472147_00532 | Not Available | Positive | 596363 - 597142 | 28166.5 |
| thioredoxin-like protein | SAMEA3472147_00533 | Not Available | Negative | 597205 - 598059 | 31762.9 |
| putative oxidoreductase with nad(p)-binding rossmann-fold domain | SAMEA3472147_00534 | Not Available | Negative | 598120 - 598890 | 28061.2 |
| multifunctional acyl-coa thioesterase i/protease i/lysophospholipase l1 | SAMEA3472147_00535 | Not Available | Negative | 598919 - 599512 | 22163.7 |
| abc transporter atp-binding protein | SAMEA3472147_00536 | Not Available | Positive | 599513 - 600199 | 24534.5 |
| putative permease | SAMEA3472147_00537 | Not Available | Positive | 600196 - 602610 | 89219.4 |
| trna 2-selenouridine synthase | SAMEA3472147_00538 | Not Available | Negative | 603322 - 604416 | 41044.0 |
| lysr family transcriptional regulator | SAMEA3472147_00539 | Not Available | Negative | 604485 - 605411 | 34504.6 |
| ureidoglycolate hydrolase | SAMEA3472147_00540 | Not Available | Positive | 605641 - 606123 | 18223.6 |
| negative regulator of allantoin and glyoxylate utilization operons | SAMEA3472147_00541 | Not Available | Positive | 606201 - 607016 | 29285.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





