Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein/permease | SAMEA3472147_00478 | Not Available | Positive | 518913 - 520685 | 66005.3 |
| multidrug abc transporter atp-binding protein | SAMEA3472147_00479 | Not Available | Positive | 520678 - 522459 | 65225.6 |
| glutamine synthetase | SAMEA3472147_00480 | Not Available | Positive | 522640 - 522978 | 12259.9 |
| ammonia channel precursor (ammonia transporter) | SAMEA3472147_00481 | Not Available | Positive | 523008 - 524294 | 44517.4 |
| acyl-coa thioesterase | SAMEA3472147_00482 | Not Available | Negative | 524343 - 525203 | 32067.3 |
| putative lipoprotein | SAMEA3472147_00483 | Not Available | Positive | 525421 - 525993 | 19442.3 |
| methylated dna-protein cysteine alkyltransferase | SAMEA3472147_00484 | Not Available | Negative | 526024 - 526335 | 11489.7 |
| rna signal recognition particle 4.5s rna | SAMEA3472147_00487 | Not Available | Positive | 526714 - 527067 | 13318.9 |
| putative signal transduction protein | SAMEA3472147_00488 | Not Available | Negative | 527109 - 528659 | 58802.9 |
| inner membrane protein | SAMEA3472147_00489 | Not Available | Negative | 528823 - 529293 | 18268.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





