Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent specificity component of clpp serine protease | SAMEA3472147_00467 | Not Available | Positive | 507456 - 508730 | 46358.7 |
| dna-binding atp-dependent protease la | SAMEA3472147_00469 | Not Available | Positive | 508918 - 511272 | 87473.4 |
| dna-binding protein hu | SAMEA3472147_00470 | Not Available | Positive | 511481 - 511753 | 9226.08 |
| peptidyl-prolyl cis-trans isomerase d | SAMEA3472147_00471 | Not Available | Positive | 511945 - 513816 | 68211.8 |
| putative dna uptake protein | SAMEA3472147_00472 | Not Available | Positive | 513967 - 514338 | 12746.5 |
| thioesterase protein ybaw | SAMEA3472147_00473 | Not Available | Positive | 514444 - 514842 | 15089.2 |
| queuosine biosynthesis protein quec | SAMEA3472147_00474 | Not Available | Negative | 514894 - 515589 | 25453.5 |
| bacterial extracellular solute-binding protein, family 5 | SAMEA3472147_00475 | Not Available | Negative | 515654 - 517354 | 64950.2 |
| putative hydrolase | SAMEA3472147_00476 | Not Available | Positive | 517454 - 518272 | 30330.6 |
| asnc family transcriptional regulator | SAMEA3472147_00477 | Not Available | Positive | 518425 - 518883 | 17438.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





