Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protoheme ix farnesyltransferase | SAMEA3472147_00457 | Not Available | Negative | 496845 - 497735 | 32250.4 |
| cytochrome o ubiquinol oxidase subunit iv | SAMEA3472147_00458 | Not Available | Negative | 497747 - 498076 | 12030.2 |
| cytochrome o ubiquinol oxidase subunit iii | SAMEA3472147_00459 | Not Available | Negative | 498076 - 498690 | 22624.0 |
| cytochrome o ubiquinol oxidase subunit i | SAMEA3472147_00460 | Not Available | Negative | 498680 - 500671 | 74372.2 |
| cytochrome o ubiquinol oxidase subunit ii | SAMEA3472147_00461 | Not Available | Negative | 500693 - 501640 | 34971.2 |
| peptidoglycan monomer (n-acetylglucosamine-1,6-anhydro-n-acetylmuramic acid-tetrapeptide) uptake protein (major facilitator superfamily protein) | SAMEA3472147_00462 | Not Available | Negative | 502100 - 503575 | 53248.3 |
| lipoprotein yajg precursor | SAMEA3472147_00463 | Not Available | Negative | 503619 - 504197 | 20951.3 |
| putative transcriptional regulator | SAMEA3472147_00464 | Not Available | Positive | 504505 - 504819 | 11889.2 |
| trigger factor | SAMEA3472147_00465 | Not Available | Positive | 505163 - 506461 | 48195.4 |
| atp-dependent clp protease proteolytic subunit | SAMEA3472147_00466 | Not Available | Positive | 506707 - 507330 | 23188.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





