Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease 7 small subunit | SAMEA3472147_00447 | Not Available | Negative | 488808 - 489050 | 8952.42 |
| thiamine biosynthesis protein thii | SAMEA3472147_00448 | Not Available | Positive | 489256 - 490704 | 54951.3 |
| dj-1 family protein | SAMEA3472147_00449 | Not Available | Negative | 490758 - 491348 | 20793.2 |
| 2-dehydropantoate 2-reductase | SAMEA3472147_00450 | Not Available | Negative | 491311 - 492222 | 33853.7 |
| nucleotide-binding protein | SAMEA3472147_00451 | Not Available | Positive | 492390 - 492881 | 18344.9 |
| transport protein yajr | SAMEA3472147_00452 | Not Available | Negative | 493009 - 494373 | 48755.9 |
| zinc-dependent hydrolase | SAMEA3472147_00453 | Not Available | Positive | 494744 - 495715 | 36211.4 |
| acetyltransferase | SAMEA3472147_00454 | Not Available | Negative | 495771 - 496286 | 18771.9 |
| acetyltransferase | SAMEA3472147_00455 | Not Available | Negative | 496264 - 496365 | 3726.35 |
| ybl13 | SAMEA3472147_00456 | Not Available | Negative | 496349 - 496660 | 11398.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





