Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative regulatory protein | SAMEA3472147_00437 | Not Available | Positive | 478924 - 479373 | 17229.9 |
| riboflavin biosynthesis protein | SAMEA3472147_00438 | Not Available | Positive | 479377 - 480480 | 40374.7 |
| 6,7-dimethyl-8-ribityllumazine synthase | SAMEA3472147_00439 | Not Available | Positive | 480569 - 481039 | 16157.4 |
| n utilization substance protein b | SAMEA3472147_00440 | Not Available | Positive | 481059 - 481478 | 15689.9 |
| thiamine-monophosphate kinase | SAMEA3472147_00441 | Not Available | Positive | 481556 - 482533 | 35053.8 |
| phosphatidylglycerophosphatase a | SAMEA3472147_00442 | Not Available | Positive | 482511 - 483026 | 19332.2 |
| non-lee-encoded type iii effector | SAMEA3472147_00443 | Not Available | Negative | 483203 - 484762 | 60316.3 |
| putative aldo/keto reductase | SAMEA3472147_00444 | Not Available | Negative | 484993 - 485967 | 36494.3 |
| 1-deoxy-d-xylulose-5-phosphate synthase | SAMEA3472147_00445 | Not Available | Negative | 486022 - 487884 | 67651.0 |
| geranyltranstransferase | SAMEA3472147_00446 | Not Available | Negative | 487909 - 488808 | 32191.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





