Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3,4,5-tetrahydropyridine-2,6-carboxylate n-succinyltransferase | SAMEA3472147_00376 | Not Available | Negative | 412426 - 413250 | 29893.8 |
| [protein-pii] uridylyltransferase | SAMEA3472147_00377 | Not Available | Negative | 413281 - 415953 | 102401.0 |
| methionine aminopeptidase | SAMEA3472147_00378 | Not Available | Negative | 416015 - 416809 | 29347.5 |
| 30s ribosomal protein s2 | SAMEA3472147_00380 | Not Available | Positive | 417177 - 417902 | 26745.2 |
| elongation factor ts | SAMEA3472147_00381 | Not Available | Positive | 418160 - 419011 | 30424.7 |
| uridylate kinase | SAMEA3472147_00382 | Not Available | Positive | 419158 - 419883 | 25971.9 |
| ribosome recycling factor | SAMEA3472147_00383 | Not Available | Positive | 420175 - 420732 | 20639.7 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | SAMEA3472147_00384 | Not Available | Positive | 420824 - 422020 | 43390.5 |
| undecaprenyl pyrophosphate synthetase | SAMEA3472147_00385 | Not Available | Positive | 422209 - 422967 | 28314.5 |
| uncharacterised protein | SAMEA3472147_00386 | Not Available | Positive | 422967 - 423119 | 4984.03 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





