Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate-1-semialdehyde 2,1-aminomutase | SAMEA3472147_00366 | Not Available | Negative | 401619 - 402899 | 45386.7 |
| h(+)/cl(-) exchange transporter | SAMEA3472147_00367 | Not Available | Positive | 403124 - 404545 | 50351.9 |
| iron-sulfur cluster insertion protein erpa | SAMEA3472147_00368 | Not Available | Positive | 404627 - 404971 | 12101.2 |
| putative membrane protein yads | SAMEA3472147_00369 | Not Available | Negative | 405018 - 405641 | 22129.1 |
| vitamin b12-binding protein | SAMEA3472147_00370 | Not Available | Negative | 405679 - 406479 | 29382.5 |
| mta/sah nucleosidase | SAMEA3472147_00371 | Not Available | Negative | 406472 - 407170 | 24385.4 |
| deoxyguanosinetriphosphate triphosphohydrolase | SAMEA3472147_00372 | Not Available | Positive | 407254 - 408771 | 59358.2 |
| protease do precursor | SAMEA3472147_00373 | Not Available | Positive | 408901 - 410325 | 49357.3 |
| carbohydrate diacid regulator | SAMEA3472147_00374 | Not Available | Positive | 410480 - 411637 | 43660.1 |
| putative structural protein | SAMEA3472147_00375 | Not Available | Negative | 411726 - 412112 | 15097.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





