Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypoxanthine-guanine phosphoribosyltransferase | SAMEA3472147_00336 | Not Available | Positive | 369495 - 370031 | 20116.4 |
| carbonic anhydrase 2 yadf | SAMEA3472147_00337 | Not Available | Negative | 370072 - 370734 | 25098.2 |
| abc transporter atp-binding protein | SAMEA3472147_00338 | Not Available | Positive | 370843 - 371769 | 34649.2 |
| inner membrane transport permease yadh | SAMEA3472147_00339 | Not Available | Positive | 371769 - 372536 | 28386.7 |
| pts system transporter subunit iia | SAMEA3472147_00340 | Not Available | Positive | 372641 - 373081 | 16527.0 |
| putative polysaccharide deacetylase | SAMEA3472147_00341 | Not Available | Positive | 373145 - 374374 | 46283.8 |
| aspartate l-decarboxylase | SAMEA3472147_00342 | Not Available | Negative | 374378 - 374758 | 13834.5 |
| transposase yhga family protein | SAMEA3472147_00343 | Not Available | Positive | 375032 - 375904 | 33808.9 |
| putative transposase | SAMEA3472147_00344 | Not Available | Positive | 375973 - 376182 | 8236.79 |
| pantoate--beta-alanine ligase | SAMEA3472147_00345 | Not Available | Negative | 376278 - 377129 | 31569.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





