Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein transport protein hofc | SAMEA3472147_00315 | Not Available | Negative | 342705 - 343370 | 24491.7 |
| protein transport protein hofc | SAMEA3472147_00316 | Not Available | Negative | 343498 - 343908 | 15026.2 |
| protein transport protein hofb | SAMEA3472147_00317 | Not Available | Negative | 343898 - 345283 | 50523.4 |
| prepilin peptidase dependent protein d precursor | SAMEA3472147_00318 | Not Available | Negative | 345293 - 345733 | 15649.7 |
| quinolinate phosphoribosyltransferase | SAMEA3472147_00319 | Not Available | Negative | 345935 - 346828 | 32774.0 |
| n-acetyl-anhydromuramyl-l-alanine-amidase | SAMEA3472147_00320 | Not Available | Positive | 346916 - 347467 | 20495.1 |
| ampe protein | SAMEA3472147_00321 | Not Available | Positive | 347464 - 348318 | 32081.8 |
| aromatic amino acid transport protein | SAMEA3472147_00322 | Not Available | Negative | 348361 - 349731 | 49547.9 |
| transcriptional regulator protein | SAMEA3472147_00323 | Not Available | Positive | 350275 - 351039 | 29427.2 |
| pyruvate dehydrogenase e1 component | SAMEA3472147_00325 | Not Available | Positive | 351200 - 353863 | 99674.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





