Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase small subunit | SAMEA3472147_00283 | Not Available | Negative | 307150 - 307755 | 22530.8 |
| 3-isopropylmalate dehydratase large subunit | SAMEA3472147_00284 | Not Available | Negative | 307766 - 309166 | 49912.8 |
| 3-isopropylmalate dehydrogenase | SAMEA3472147_00285 | Not Available | Negative | 309169 - 310260 | 39503.2 |
| 2-isopropylmalate synthase | SAMEA3472147_00286 | Not Available | Negative | 310260 - 311831 | 57287.1 |
| leucine transcriptional activator | SAMEA3472147_00288 | Not Available | Positive | 312668 - 313612 | 35667.7 |
| acetolactate synthase 3 catalytic subunit | SAMEA3472147_00289 | Not Available | Positive | 313930 - 315654 | 62972.0 |
| acetolactate synthase 3 regulatory subunit | SAMEA3472147_00290 | Not Available | Positive | 315657 - 316148 | 18035.9 |
| transcriptional regulator of the control of carbon and energy metabolism galr/laci family | SAMEA3472147_00291 | Not Available | Positive | 316328 - 317332 | 38050.6 |
| cell division protein mraz | SAMEA3472147_00292 | Not Available | Positive | 317934 - 318392 | 17361.0 |
| s-adenosyl-methyltransferase mraw | SAMEA3472147_00293 | Not Available | Positive | 318394 - 319335 | 34879.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





