Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-arabinose isomerase | SAMEA3472147_00271 | Not Available | Negative | 295375 - 296877 | 56092.1 |
| ribulokinase | SAMEA3472147_00272 | Not Available | Negative | 296888 - 298588 | 61156.7 |
| dna-binding transcriptional regulator arac | SAMEA3472147_00273 | Not Available | Positive | 298927 - 299805 | 33385.8 |
| deda family integral membrane protein | SAMEA3472147_00274 | Not Available | Positive | 299891 - 300655 | 28213.8 |
| thiamine transporter atp-binding subunit | SAMEA3472147_00275 | Not Available | Negative | 300742 - 301440 | 25005.7 |
| thiamine abc transport system, permease protein | SAMEA3472147_00276 | Not Available | Negative | 301424 - 303034 | 59391.6 |
| thiamine transporter substrate binding subunit | SAMEA3472147_00277 | Not Available | Negative | 303010 - 303993 | 36169.2 |
| putative type iii effector protein | SAMEA3472147_00279 | Not Available | Positive | 304365 - 304934 | 21495.3 |
| uncharacterised protein | SAMEA3472147_00280 | Not Available | Positive | 304900 - 305007 | 4006.01 |
| putative substrate-binding protein | SAMEA3472147_00281 | Not Available | Negative | 305164 - 306822 | 64053.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





