Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dimethyladenosine transferase (s-adenosylmethionine-6-n',n'-adenosyl (rrna) dimethyltransferase) | SAMEA3472147_00261 | Not Available | Negative | 280309 - 281130 | 30422.0 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | SAMEA3472147_00262 | Not Available | Negative | 281127 - 282116 | 35214.0 |
| chaperone precursor (peptidyl-prolyl cis-trans isomerase) | SAMEA3472147_00263 | Not Available | Negative | 282116 - 283402 | 47286.5 |
| organic solvent tolerance protein | SAMEA3472147_00264 | Not Available | Negative | 283455 - 285809 | 89689.8 |
| dna-j like membrane chaperone protein | SAMEA3472147_00265 | Not Available | Positive | 286064 - 286879 | 30567.2 |
| non-lee-encoded type iii effector | SAMEA3472147_00266 | Not Available | Positive | 287174 - 287926 | 27906.6 |
| ribosomal large subunit pseudouridine synthase a | SAMEA3472147_00267 | Not Available | Negative | 288344 - 289003 | 24890.1 |
| rna polymerase-associated protein | SAMEA3472147_00268 | Not Available | Negative | 289015 - 291921 | 109787.0 |
| dna polymerase ii | SAMEA3472147_00269 | Not Available | Negative | 292085 - 294436 | 90000.5 |
| l-ribulose-5-phosphate 4-epimerase | SAMEA3472147_00270 | Not Available | Negative | 294511 - 295206 | 25503.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





