Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s20 | SAMEA3472147_00231 | Not Available | Negative | 248985 - 249248 | 9684.94 |
| riboflavin biosynthesis protein | SAMEA3472147_00232 | Not Available | Positive | 249577 - 250518 | 34766.4 |
| isoleucyl-trna synthetase | SAMEA3472147_00233 | Not Available | Positive | 250561 - 253377 | 104242.0 |
| lipoprotein signal peptidase | SAMEA3472147_00234 | Not Available | Positive | 253377 - 253871 | 18129.3 |
| fkbb-type 16 kd peptidyl-prolyl cis-trans isomerase | SAMEA3472147_00235 | Not Available | Positive | 253959 - 254408 | 16081.9 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SAMEA3472147_00236 | Not Available | Positive | 254410 - 255360 | 34794.6 |
| nonspecific ribonucleoside hydrolase (purine/pyrimidine ribonucleoside hydrolase) | SAMEA3472147_00237 | Not Available | Positive | 255426 - 256340 | 32626.8 |
| dihydrodipicolinate reductase | SAMEA3472147_00238 | Not Available | Positive | 256507 - 257328 | 28758.3 |
| carbamoyl phosphate synthase small subunit | SAMEA3472147_00239 | Not Available | Positive | 257784 - 258932 | 41433.4 |
| carbamoyl-phosphate synthase large subunit | SAMEA3472147_00240 | Not Available | Positive | 258950 - 262171 | 117877.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





