Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavohemoprotein | SAMEA3472147_00188 | Not Available | Positive | 205430 - 206620 | 43840.0 |
| nitrogen regulatory protein p-ii 1 | SAMEA3472147_00189 | Not Available | Negative | 206665 - 207003 | 12426.2 |
| two component system dna-binding response regulator | SAMEA3472147_00190 | Not Available | Negative | 207064 - 208398 | 49151.3 |
| putative lipoprotein | SAMEA3472147_00191 | Not Available | Negative | 208388 - 209101 | 27305.3 |
| sensor-like histidine kinase yfhk | SAMEA3472147_00192 | Not Available | Negative | 209266 - 210648 | 51415.1 |
| phosphoribosylformylglycinamidine synthase | SAMEA3472147_00195 | Not Available | Negative | 211269 - 215156 | 141437.0 |
| putative lytic transglycosylase | SAMEA3472147_00196 | Not Available | Positive | 215415 - 216971 | 58305.3 |
| pp_00184 | SAMEA3472147_00197 | Not Available | Negative | 216968 - 217471 | Not Available |
| had hydrolase yfhb | SAMEA3472147_00198 | Not Available | Negative | 217529 - 218164 | 24437.8 |
| rpir-family transcriptional regulator | SAMEA3472147_00199 | Not Available | Positive | 218373 - 219221 | 30709.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





