Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-mercaptopyruvate sulfurtransferase | SAMEA3472147_00154 | Not Available | Positive | 171979 - 172824 | 30885.6 |
| peptidase b (aminopeptidase b) | SAMEA3472147_00158 | Not Available | Negative | 174921 - 176204 | 46196.6 |
| fes assembly protein iscx | SAMEA3472147_00159 | Not Available | Negative | 176449 - 176649 | 7759.98 |
| ferredoxin | SAMEA3472147_00160 | Not Available | Negative | 176661 - 176996 | 12345.5 |
| chaperone protein hsca | SAMEA3472147_00161 | Not Available | Negative | 176998 - 178848 | 65698.4 |
| co-chaperone hscb | SAMEA3472147_00162 | Not Available | Negative | 178865 - 179380 | 20138.8 |
| iron-sulfur cluster assembly protein | SAMEA3472147_00163 | Not Available | Negative | 179476 - 179799 | 11556.7 |
| nifu-like protein | SAMEA3472147_00164 | Not Available | Negative | 179816 - 180202 | 13849.3 |
| cysteine desulfurase | SAMEA3472147_00165 | Not Available | Negative | 180230 - 181444 | 45092.2 |
| fes cluster assembly transcription factor iscr | SAMEA3472147_00167 | Not Available | Negative | 181556 - 182044 | 17337.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





