Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved putative protein | SAMEA3472147_05136 | Not Available | Negative | 5201904 - 5202137 | 9042.66 |
| single-stranded dna-binding protein | SAMEA3472147_05137 | Not Available | Negative | 5202200 - 5202733 | 19434.0 |
| uncharacterised protein | SAMEA3472147_05138 | Not Available | Positive | 5202971 - 5203078 | 3959.99 |
| toxin-antitoxin system, toxin component | SAMEA3472147_05139 | Not Available | Positive | 5203106 - 5203435 | 12563.5 |
| dna-binding protein | SAMEA3472147_05140 | Not Available | Positive | 5203416 - 5203697 | 10972.2 |
| putative transcriptional regulator | SAMEA3472147_05141 | Not Available | Positive | 5203712 - 5204038 | 11464.5 |
| uncharacterised protein | SAMEA3472147_05142 | Not Available | Negative | 5204587 - 5205351 | 29076.5 |
| putative vgrg/e protein associated with rhs elements | SAMEA3472147_05143 | Not Available | Negative | 5205364 - 5205690 | 11089.9 |
| ycja | SAMEA3472147_05144 | Not Available | Positive | 5206016 - 5206435 | 15688.7 |
| plasmid protein | SAMEA3472147_05145 | Not Available | Positive | 5206435 - 5206626 | 7292.81 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





