Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative phage tail fiber protein | SAMEA3472147_05126 | Not Available | Negative | 5191041 - 5191352 | 11549.8 |
| immunoglobulin a1 protease domain protein | SAMEA3472147_05127 | Not Available | Positive | 5191521 - 5192846 | 47745.6 |
| resolvase domain-containing protein | SAMEA3472147_05128 | Not Available | Positive | 5192812 - 5193069 | 9748.69 |
| putative zinc-binding dehydrogenase | SAMEA3472147_05129 | Not Available | Positive | 5193746 - 5194789 | 37703.0 |
| putative sugar-bisphosphate aldolase | SAMEA3472147_05130 | Not Available | Positive | 5194810 - 5195430 | 22996.0 |
| uncharacterised protein | SAMEA3472147_05131 | Not Available | Negative | 5195680 - 5195772 | 3229.72 |
| putative tail fiber protein from prophage | SAMEA3472147_05132 | Not Available | Negative | 5195790 - 5196842 | 34596.8 |
| putative prophage-encoded outer membrane protein | SAMEA3472147_05133 | Not Available | Negative | 5196907 - 5197506 | 21727.1 |
| tail assembly protein i | SAMEA3472147_05134 | Not Available | Positive | 5197619 - 5197861 | 8502.2 |
| plasmid replication protein | SAMEA3472147_05135 | Not Available | Positive | 5200476 - 5200952 | 17961.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





