Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative cytoplasmic protein | SAMEA3472147_05116 | Not Available | Positive | 5183095 - 5183316 | 8675.34 |
| protein of uncharacterised function (duf1380) | SAMEA3472147_05117 | Not Available | Positive | 5183330 - 5183764 | 16116.2 |
| ycha | SAMEA3472147_05118 | Not Available | Positive | 5183810 - 5184586 | 28811.6 |
| uncharacterised protein | SAMEA3472147_05119 | Not Available | Positive | 5184540 - 5184785 | 8222.09 |
| uncharacterised protein | SAMEA3472147_05120 | Not Available | Positive | 5184967 - 5185377 | 14985.4 |
| tail tip fiber protein | SAMEA3472147_05121 | Not Available | Positive | 5185374 - 5186642 | 45439.1 |
| outer membrane protein | SAMEA3472147_05122 | Not Available | Positive | 5186657 - 5186935 | 10475.4 |
| replication protein | SAMEA3472147_05123 | Not Available | Positive | 5187172 - 5187873 | 26956.2 |
| uncharacterised protein | SAMEA3472147_05124 | Not Available | Positive | 5187877 - 5188143 | 10190.5 |
| cp4-44 prophage | SAMEA3472147_05125 | Not Available | Negative | 5189349 - 5190653 | 47514.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





