Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component transcriptional regulator, luxr family | SAMEA3472147_05106 | Not Available | Negative | 5174593 - 5175225 | 23664.9 |
| Trna-arg | Not Available | Not Available | Positive | 5175468 - 5175544 | Not Available |
| site-specific recombinase, phage integrase family protein | SAMEA3472147_05108 | Not Available | Negative | 5175560 - 5176723 | 45004.4 |
| is66 family transposase orfb | SAMEA3472147_05109 | Not Available | Negative | 5177192 - 5178763 | 58705.1 |
| transposase | SAMEA3472147_05110 | Not Available | Negative | 5178783 - 5179130 | 13055.0 |
| transposase | SAMEA3472147_05111 | Not Available | Negative | 5179130 - 5179777 | 23988.3 |
| uncharacterised protein | SAMEA3472147_05112 | Not Available | Negative | 5179955 - 5180173 | 7917.85 |
| general secretion pathway protein d | SAMEA3472147_05113 | Not Available | Negative | 5180170 - 5181561 | 50364.7 |
| uncharacterised protein | SAMEA3472147_05114 | Not Available | Negative | 5181558 - 5182133 | 21345.7 |
| dna methylase | SAMEA3472147_05115 | Not Available | Positive | 5182411 - 5183094 | 25444.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





