Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | SAMEA3472147_05085 | Not Available | Negative | 5151126 - 5152178 | 41325.3 |
| transposase | SAMEA3472147_05086 | Not Available | Negative | 5152216 - 5153007 | 28908.8 |
| is91, orf2 | SAMEA3472147_05087 | Not Available | Negative | 5153007 - 5153372 | 13828.4 |
| prophage lambda integrase | SAMEA3472147_05088 | Not Available | Negative | 5153802 - 5154920 | 42699.5 |
| excisionase for prophage | SAMEA3472147_05089 | Not Available | Negative | 5154889 - 5155158 | 10185.4 |
| exonuclease rnase t and dna polymerase iii | SAMEA3472147_05090 | Not Available | Negative | 5155466 - 5156719 | 46037.5 |
| Trna-gly | Not Available | Not Available | Positive | 5157357 - 5157431 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 5157433 - 5157509 | Not Available |
| Trna-pseudo | Not Available | Not Available | Positive | 5157511 - 5157586 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 5157588 - 5157663 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





