Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative cytoplasmic protein | SAMEA3472147_05075 | Not Available | Positive | 5141043 - 5141264 | 8675.34 |
| protein of uncharacterised function (duf1380) | SAMEA3472147_05076 | Not Available | Positive | 5141278 - 5141712 | 16117.2 |
| ycha | SAMEA3472147_05077 | Not Available | Positive | 5141757 - 5142527 | 28890.7 |
| uncharacterised protein | SAMEA3472147_05078 | Not Available | Positive | 5142527 - 5142727 | 6747.62 |
| putative antirestriction protein | SAMEA3472147_05079 | Not Available | Positive | 5142939 - 5143364 | 16330.5 |
| is91, orf2 | SAMEA3472147_05080 | Not Available | Negative | 5143780 - 5144145 | 13617.1 |
| uncharacterised protein | SAMEA3472147_05081 | Not Available | Negative | 5145695 - 5145982 | 10499.7 |
| lysine decarboxylase 1 | SAMEA3472147_05082 | Not Available | Negative | 5147157 - 5147477 | 12593.1 |
| cadaverine/lysine antiporter | SAMEA3472147_05083 | Not Available | Negative | 5147556 - 5148890 | 46667.8 |
| transcriptional activator | SAMEA3472147_05084 | Not Available | Negative | 5149256 - 5150083 | 31223.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





