Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catalase/peroxidase hpi | SAMEA3472147_05055 | Not Available | Positive | 5122155 - 5124365 | 81746.5 |
| cytochrome b562 family protein | SAMEA3472147_05056 | Not Available | Positive | 5124409 - 5124798 | 14641.8 |
| putative antitoxin of toxin-antitoxin system | SAMEA3472147_05057 | Not Available | Positive | 5125686 - 5125937 | 9222.97 |
| toxin of the rele-relb toxin-antitoxin system | SAMEA3472147_05058 | Not Available | Positive | 5125927 - 5126208 | 10978.5 |
| transposase | SAMEA3472147_05059 | Not Available | Negative | 5126487 - 5127104 | 23318.8 |
| putative transposase | SAMEA3472147_05060 | Not Available | Positive | 5127198 - 5127668 | 17574.7 |
| transposase | SAMEA3472147_05061 | Not Available | Positive | 5127669 - 5127854 | 6879.29 |
| uncharacterised protein | SAMEA3472147_05062 | Not Available | Negative | 5128152 - 5128709 | 21359.9 |
| is3 element transposase | SAMEA3472147_05063 | Not Available | Negative | 5129064 - 5129930 | 33433.2 |
| transposase | SAMEA3472147_05064 | Not Available | Negative | 5129927 - 5130226 | 11407.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





