Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp-binding protein enga | SAMEA3472147_00143 | Not Available | Negative | 155368 - 156840 | 54996.1 |
| putative dehydrogenase | SAMEA3472147_00144 | Not Available | Negative | 156958 - 158136 | 41859.6 |
| conserved protein, upf0070 family | SAMEA3472147_00145 | Not Available | Negative | 158147 - 158767 | 22177.2 |
| histidyl-trna synthetase | SAMEA3472147_00146 | Not Available | Negative | 158785 - 160059 | 47032.2 |
| putative regulatory protein | SAMEA3472147_00148 | Not Available | Negative | 161315 - 162328 | 36174.5 |
| radical sam protein | SAMEA3472147_00149 | Not Available | Negative | 162613 - 163767 | 43088.0 |
| nucleoside diphosphate kinase | SAMEA3472147_00150 | Not Available | Negative | 163917 - 164348 | 15464.3 |
| penicillin-binding protein 1c | SAMEA3472147_00151 | Not Available | Negative | 164497 - 166809 | 85066.9 |
| putative protease inhibitor | SAMEA3472147_00152 | Not Available | Negative | 166810 - 167589 | 28381.5 |
| putative protease inhibitor | SAMEA3472147_00153 | Not Available | Negative | 167573 - 171772 | 153590.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





