Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472147_05030 | Not Available | Negative | 5095966 - 5096130 | 6138.51 |
| conjugal transfer nickase/helicase trai | SAMEA3472147_05032 | Not Available | Negative | 5097559 - 5099751 | 80350.2 |
| trad protein | SAMEA3472147_05033 | Not Available | Negative | 5099751 - 5101976 | 84181.5 |
| Trna-ala | Not Available | Not Available | Positive | 5105368 - 5105443 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 5105486 - 5105562 | Not Available |
| udp-n-acetylenolpyruvoylglucosamine reductase | SAMEA3472147_05040 | Not Available | Positive | 5107590 - 5108618 | 37875.2 |
| bifunctional protein | SAMEA3472147_05041 | Not Available | Positive | 5108615 - 5109580 | 35300.1 |
| pantothenate kinase | SAMEA3472147_05042 | Not Available | Negative | 5109609 - 5110535 | 35430.6 |
| Trna-thr | Not Available | Not Available | Positive | 5110921 - 5110996 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 5111005 - 5111089 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





