Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replication protein | SAMEA3472147_05010 | Not Available | Positive | 5082154 - 5083239 | 41530.8 |
| uncharacterised protein | SAMEA3472147_05011 | Not Available | Positive | 5083260 - 5083976 | 27619.4 |
| putative transport protein | SAMEA3472147_05012 | Not Available | Negative | 5084034 - 5084606 | 21213.5 |
| replication gene a protein from bacteriophage origin | SAMEA3472147_05013 | Not Available | Positive | 5085244 - 5087160 | 71965.8 |
| putative bacteriophage protein | SAMEA3472147_05014 | Not Available | Positive | 5087291 - 5087560 | 10082.5 |
| phage protein | SAMEA3472147_05015 | Not Available | Positive | 5087571 - 5088656 | 39893.1 |
| antiterminator q protein of prophage cp-933k | SAMEA3472147_05016 | Not Available | Positive | 5088658 - 5089359 | 27064.7 |
| lipoprotein | SAMEA3472147_05017 | Not Available | Positive | 5089565 - 5089759 | 7377.94 |
| envelope protein encoded within prophage cp-933n | SAMEA3472147_05018 | Not Available | Positive | 5089897 - 5090610 | 26726.0 |
| Trna-met | Not Available | Not Available | Positive | 5090639 - 5090714 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





