Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine recombinase | SAMEA3472147_04958 | Not Available | Negative | 5035078 - 5035680 | 23008.8 |
| n-acetylneuraminic acid outer membrane porin | SAMEA3472147_04959 | Not Available | Positive | 5037137 - 5037853 | 27871.4 |
| n-acetylneuraminic acid mutarotase | SAMEA3472147_04960 | Not Available | Positive | 5037873 - 5038979 | 39541.2 |
| yjhs protein | SAMEA3472147_04961 | Not Available | Positive | 5039043 - 5040023 | 36966.0 |
| putative restriction endonuclease | SAMEA3472147_04962 | Not Available | Positive | 5040235 - 5040510 | 10402.5 |
| putative antibiotic efflux protein | SAMEA3472147_04963 | Not Available | Positive | 5040830 - 5041696 | 30627.6 |
| ph-inducible protein involved in stress response (putative kinase) | SAMEA3472147_04964 | Not Available | Positive | 5041777 - 5042427 | 25307.5 |
| putative ferredoxin | SAMEA3472147_04965 | Not Available | Negative | 5042481 - 5042735 | 9275.25 |
| ribonucleotide-diphosphate reductase subunit beta | SAMEA3472147_04966 | Not Available | Negative | 5042735 - 5043865 | 43503.6 |
| ribonucleoside-diphosphate reductase | SAMEA3472147_04967 | Not Available | Negative | 5044092 - 5046377 | 85722.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





