Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein conserved in bacteria | SAMEA3472147_04936 | Not Available | Positive | 5013516 - 5014079 | 21833.3 |
| uncharacterised protein | SAMEA3472147_04937 | Not Available | Positive | 5014649 - 5015314 | 25199.3 |
| is1414, transposase | SAMEA3472147_04938 | Not Available | Positive | 5015471 - 5016394 | 34480.6 |
| uncharacterised protein | SAMEA3472147_04940 | Not Available | Positive | 5017874 - 5018383 | 19099.2 |
| uncharacterised protein | SAMEA3472147_04941 | Not Available | Positive | 5018544 - 5019113 | 21496.2 |
| fimh protein | SAMEA3472147_04942 | Not Available | Negative | 5019559 - 5020461 | 31447.1 |
| p pilus assembly protein, pilin fima | SAMEA3472147_04943 | Not Available | Negative | 5020481 - 5020984 | 17413.4 |
| fimf protein | SAMEA3472147_04944 | Not Available | Negative | 5020997 - 5021527 | 18733.4 |
| outer membrane usher protein fimd | SAMEA3472147_04945 | Not Available | Negative | 5021537 - 5024173 | 96561.9 |
| type i fimbrial chaperone | SAMEA3472147_04946 | Not Available | Negative | 5024240 - 5024965 | 26690.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





