Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replication protein | SAMEA3472147_04916 | Not Available | Negative | 4998324 - 4998584 | 9811.86 |
| w0003 | SAMEA3472147_04917 | Not Available | Negative | 4998824 - 4999414 | 22946.3 |
| hha-family regulatory protein | SAMEA3472147_04918 | Not Available | Negative | 4999452 - 4999661 | 8321.03 |
| nuclease | SAMEA3472147_04919 | Not Available | Negative | 4999707 - 5000168 | 17770.6 |
| uncharacterised protein | SAMEA3472147_04920 | Not Available | Negative | 5000367 - 5000621 | 8624.03 |
| conjugal transfer fertility inhibition protein fino | SAMEA3472147_04921 | Not Available | Negative | 5000757 - 5001317 | 21192.8 |
| conjugal transfer pilus acetylation protein trax | SAMEA3472147_04922 | Not Available | Negative | 5001372 - 5002118 | 27434.7 |
| protein trai | SAMEA3472147_04923 | Not Available | Negative | 5002138 - 5002569 | 16341.0 |
| conjugal transfer surface exclusion protein trat | SAMEA3472147_04924 | Not Available | Negative | 5003713 - 5004444 | 25907.2 |
| conjugal transfer entry exclusion protein tras | SAMEA3472147_04925 | Not Available | Negative | 5004458 - 5004967 | 19512.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





