Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rfbu-like protein | SAMEA3472147_04895 | Not Available | Positive | 4979734 - 4980840 | 41090.3 |
| inner membrane protein | SAMEA3472147_04896 | Not Available | Positive | 4980930 - 4982651 | 66097.8 |
| lipid a biosynthesis (kdo)2-(lauroyl)-lipid iva acyltransferase | SAMEA3472147_04897 | Not Available | Positive | 4982778 - 4983713 | 35337.1 |
| issd1, transposase orfb | SAMEA3472147_04898 | Not Available | Negative | 4983877 - 4984251 | 14543.4 |
| putative is1294 transposase | SAMEA3472147_04899 | Not Available | Positive | 4984352 - 4984612 | 9397.29 |
| is1414, transposase | SAMEA3472147_04900 | Not Available | Positive | 4984661 - 4985467 | 30288.4 |
| protein involved in detoxification of methylglyoxal | SAMEA3472147_04901 | Not Available | Negative | 4986642 - 4987475 | 31348.8 |
| conserved protein, upf0345 family | SAMEA3472147_04902 | Not Available | Negative | 4987619 - 4987903 | 10234.9 |
| putative chorismate biosynthesis protein | SAMEA3472147_04903 | Not Available | Negative | 4987975 - 4988652 | 24900.4 |
| protein | SAMEA3472147_04904 | Not Available | Negative | 4988910 - 4989101 | 7281.55 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





