Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | SAMEA3472147_04885 | Not Available | Negative | 4969750 - 4970676 | 34582.3 |
| major facilitator transporter | SAMEA3472147_04886 | Not Available | Positive | 4970799 - 4972157 | 48273.4 |
| gentisate 1,2-dioxygenase | SAMEA3472147_04887 | Not Available | Positive | 4972169 - 4973197 | 38423.3 |
| fumarylacetoacetate hydrolase | SAMEA3472147_04888 | Not Available | Positive | 4973213 - 4973914 | 25783.7 |
| glutathione-s-transferase | SAMEA3472147_04889 | Not Available | Positive | 4973923 - 4974567 | 24242.1 |
| salicylate hydroxylase | SAMEA3472147_04890 | Not Available | Positive | 4974582 - 4975775 | 44003.5 |
| uncharacterised protein | SAMEA3472147_04891 | Not Available | Positive | 4976026 - 4976421 | 14887.2 |
| uncharacterised protein | SAMEA3472147_04892 | Not Available | Positive | 4977084 - 4977530 | 17604.0 |
| resolvase | SAMEA3472147_04893 | Not Available | Positive | 4977962 - 4978576 | 22283.2 |
| polysaccharide deacetylase family protein | SAMEA3472147_04894 | Not Available | Positive | 4978913 - 4979734 | 32143.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





