Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanine--d-alanine ligase | SAMEA3472147_04875 | Not Available | Negative | 4958609 - 4959703 | 39318.0 |
| uncharacterised protein | SAMEA3472147_04876 | Not Available | Positive | 4960223 - 4960441 | 8100.97 |
| uncharacterised protein | SAMEA3472147_04877 | Not Available | Negative | 4960504 - 4960965 | 16857.8 |
| small gtp-binding domain protein | SAMEA3472147_04878 | Not Available | Negative | 4961136 - 4962035 | 33307.8 |
| uncharacterised protein | SAMEA3472147_04879 | Not Available | Negative | 4962016 - 4962423 | 15170.1 |
| putative transcriptional regulator, hth | SAMEA3472147_04880 | Not Available | Negative | 4962416 - 4963342 | 34824.3 |
| putative dna-directed dna polymerase | SAMEA3472147_04881 | Not Available | Negative | 4963605 - 4966205 | 97414.6 |
| uncharacterised protein | SAMEA3472147_04882 | Not Available | Negative | 4966265 - 4966867 | 22170.4 |
| helix-turn-helix domain | SAMEA3472147_04883 | Not Available | Negative | 4966899 - 4967087 | 7150.69 |
| phage integrase | SAMEA3472147_04884 | Not Available | Negative | 4967248 - 4968369 | 42896.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





