Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative inner membrane protein | SAMEA3472147_04865 | Not Available | Positive | 4947288 - 4948019 | 26329.2 |
| protein disaggregation chaperone | SAMEA3472147_04866 | Not Available | Positive | 4948149 - 4950722 | 95590.8 |
| putative flagellin structural protein | SAMEA3472147_04867 | Not Available | Positive | 4951252 - 4953198 | 68777.1 |
| dna-binding transcriptional regulator | SAMEA3472147_04868 | Not Available | Positive | 4953286 - 4953909 | 23973.1 |
| penicillin-binding protein | SAMEA3472147_04869 | Not Available | Negative | 4953910 - 4955067 | 41851.5 |
| uncharacterised protein | SAMEA3472147_04870 | Not Available | Negative | 4955113 - 4955214 | 3919.98 |
| putative microcin b17 uptake protein | SAMEA3472147_04871 | Not Available | Positive | 4955419 - 4956639 | 46461.9 |
| putative lipoprotein | SAMEA3472147_04872 | Not Available | Positive | 4956652 - 4957746 | 40412.5 |
| inner membrane protein | SAMEA3472147_04873 | Not Available | Negative | 4957805 - 4958113 | 11425.2 |
| putative membrane protein yaiz | SAMEA3472147_04874 | Not Available | Positive | 4958373 - 4958585 | 8097.92 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





