Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sucrose-6-phosphate hydrolase | SAMEA3472147_04855 | Not Available | Positive | 4937330 - 4938763 | 54417.8 |
| sucrose operon repressor | SAMEA3472147_04856 | Not Available | Negative | 4938771 - 4939724 | 35163.1 |
| permease dsdx | SAMEA3472147_04857 | Not Available | Positive | 4940009 - 4940227 | 7740.56 |
| d-serine dehydratase | SAMEA3472147_04858 | Not Available | Positive | 4940245 - 4941573 | 47953.3 |
| putative tail fiber protein from prophage | SAMEA3472147_04859 | Not Available | Positive | 4942393 - 4943274 | 29967.2 |
| putative phage tail fiber protein | SAMEA3472147_04860 | Not Available | Positive | 4943292 - 4943906 | 22549.5 |
| outer membrane protein x | SAMEA3472147_04861 | Not Available | Positive | 4944130 - 4944660 | 19132.3 |
| translation inhibitor protein raia | SAMEA3472147_04862 | Not Available | Negative | 4944827 - 4945168 | 12785.3 |
| outer membrane protein assembly complex subunit yfio | SAMEA3472147_04863 | Not Available | Negative | 4945439 - 4946176 | 27830.9 |
| 23s rrna pseudouridine synthase | SAMEA3472147_04864 | Not Available | Positive | 4946311 - 4947291 | 37109.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





