Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd-family secretion protein | SAMEA3472147_04845 | Not Available | Negative | 4926464 - 4927600 | 41772.6 |
| inner membrane protein | SAMEA3472147_04846 | Not Available | Negative | 4927606 - 4927929 | 12409.3 |
| lactaldehyde dehydrogenase | SAMEA3472147_04847 | Not Available | Negative | 4928474 - 4930012 | 56382.6 |
| putative alcohol dehydrogenase | SAMEA3472147_04848 | Not Available | Negative | 4930177 - 4931328 | 40379.8 |
| uncharacterised protein | SAMEA3472147_04849 | Not Available | Positive | 4931809 - 4932144 | 13049.3 |
| lipoprotein | SAMEA3472147_04850 | Not Available | Negative | 4932326 - 4933081 | 27979.2 |
| transporter protein | SAMEA3472147_04851 | Not Available | Positive | 4933258 - 4934307 | 39031.6 |
| Trna-arg | Not Available | Not Available | Positive | 4934383 - 4934457 | Not Available |
| galactoside permease | SAMEA3472147_04853 | Not Available | Negative | 4934881 - 4936128 | 46919.3 |
| aminoimidazole riboside kinase | SAMEA3472147_04854 | Not Available | Negative | 4936200 - 4937114 | 33051.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





