Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transposase | SAMEA3472147_04834 | Not Available | Positive | 4916665 - 4917231 | 21255.7 |
| transposase (partial) | SAMEA3472147_04835 | Not Available | Positive | 4917350 - 4917556 | 7835.13 |
| arac family transcriptional regulator | SAMEA3472147_04836 | Not Available | Positive | 4917795 - 4918583 | 29907.5 |
| is1414, transposase | SAMEA3472147_04838 | Not Available | Negative | 4918913 - 4919311 | 15430.3 |
| is1414, transposase | SAMEA3472147_04839 | Not Available | Negative | 4919251 - 4920081 | 30689.1 |
| transposase | SAMEA3472147_04840 | Not Available | Negative | 4920470 - 4920718 | 9633.91 |
| permease | SAMEA3472147_04841 | Not Available | Positive | 4921118 - 4922518 | 51409.9 |
| ybl149 | SAMEA3472147_04842 | Not Available | Positive | 4922529 - 4924499 | 75018.9 |
| putative scaffolding protein | SAMEA3472147_04843 | Not Available | Negative | 4924629 - 4925369 | 27370.9 |
| lysr family transcriptional regulator | SAMEA3472147_04844 | Not Available | Positive | 4925493 - 4926467 | 37285.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





