Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase tn3 | SAMEA3472147_04824 | Not Available | Positive | 4899873 - 4902287 | 90023.2 |
| tn1721 transposase | SAMEA3472147_04825 | Not Available | Positive | 4902259 - 4902828 | 21805.6 |
| serine protease espp | SAMEA3472147_04826 | Not Available | Positive | 4903740 - 4907663 | 141805.0 |
| uncharacterised protein | SAMEA3472147_04827 | Not Available | Positive | 4908014 - 4908190 | 6673.85 |
| transposase | SAMEA3472147_04828 | Not Available | Positive | 4908231 - 4908650 | 15781.9 |
| transposase | SAMEA3472147_04829 | Not Available | Positive | 4908647 - 4909003 | 13017.6 |
| transposase | SAMEA3472147_04830 | Not Available | Positive | 4909826 - 4910188 | 13504.9 |
| secreted autotransporter serine protease | SAMEA3472147_04831 | Not Available | Negative | 4910497 - 4914588 | 145461.0 |
| transposase | SAMEA3472147_04832 | Not Available | Positive | 4915077 - 4915601 | 19760.9 |
| transposase is3 family | SAMEA3472147_04833 | Not Available | Negative | 4915809 - 4916474 | 25984.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





