Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative symport protein | SAMEA3472147_04794 | Not Available | Positive | 4867653 - 4868933 | 45291.1 |
| class i fumarate hydratase | SAMEA3472147_04795 | Not Available | Positive | 4869041 - 4870693 | 60090.7 |
| cobinamide adenosyltransferase (cobalamine adenosyltransferase) | SAMEA3472147_04796 | Not Available | Positive | 4870703 - 4871305 | 22373.7 |
| lysr family transcriptional regulator | SAMEA3472147_04797 | Not Available | Negative | 4871339 - 4872244 | 34349.4 |
| putative type iii effector protein | SAMEA3472147_04798 | Not Available | Positive | 4872929 - 4873666 | 29018.8 |
| chorismate lyase | SAMEA3472147_04799 | Not Available | Positive | 4873889 - 4874386 | 18795.0 |
| 4-hydroxybenzoate octaprenyltransferase | SAMEA3472147_04800 | Not Available | Positive | 4874399 - 4875271 | 32513.6 |
| glycerol-3-phosphate acyltransferase | SAMEA3472147_04801 | Not Available | Negative | 4875426 - 4877849 | 91416.9 |
| diacylglycerol kinase | SAMEA3472147_04802 | Not Available | Positive | 4878020 - 4878388 | 13245.4 |
| lexa repressor | SAMEA3472147_04803 | Not Available | Positive | 4878498 - 4879106 | 22359.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





