Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is2 element protein | SAMEA3472147_04784 | Not Available | Negative | 4857404 - 4858309 | 34308.8 |
| is2 element protein | SAMEA3472147_04785 | Not Available | Negative | 4858391 - 4859260 | 33080.2 |
| uncharacterised protein | SAMEA3472147_04786 | Not Available | Positive | 4859513 - 4860211 | 27265.4 |
| uncharacterised protein | SAMEA3472147_04787 | Not Available | Positive | 4860292 - 4860714 | 15661.5 |
| methylaspartate mutase subunit s | SAMEA3472147_04788 | Not Available | Positive | 4861262 - 4861711 | 16418.6 |
| methylaspartate mutase | SAMEA3472147_04789 | Not Available | Positive | 4861711 - 4863099 | 50507.5 |
| methylaspartate mutase e chain | SAMEA3472147_04790 | Not Available | Positive | 4863118 - 4864563 | 53070.8 |
| methylaspartate ammonia-lyase | SAMEA3472147_04791 | Not Available | Positive | 4864563 - 4865804 | 45580.8 |
| putative 3-methylaspartate ammonia-lyase, glutamate mutase | SAMEA3472147_04792 | Not Available | Positive | 4865808 - 4867178 | 49129.6 |
| uncharacterised protein | SAMEA3472147_04793 | Not Available | Positive | 4867175 - 4867492 | 11912.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





