Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| apolipoprotein n-acyltransferase | SAMEA3472147_04754 | Not Available | Negative | 4837105 - 4838643 | 57097.1 |
| magnesium and cobalt efflux protein | SAMEA3472147_04755 | Not Available | Negative | 4838668 - 4839546 | 33300.4 |
| metalloprotease | SAMEA3472147_04756 | Not Available | Negative | 4839636 - 4840103 | 17526.6 |
| phoh-like protein | SAMEA3472147_04757 | Not Available | Negative | 4840100 - 4841179 | 40656.9 |
| pp_04528 | SAMEA3472147_04758 | Not Available | Negative | 4841293 - 4842717 | Not Available |
| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | SAMEA3472147_04759 | Not Available | Positive | 4842863 - 4844038 | 42989.9 |
| uncharacterised protein | SAMEA3472147_04760 | Not Available | Negative | 4844045 - 4844629 | 22137.5 |
| Trna-gln | Not Available | Not Available | Positive | 4844752 - 4844826 | Not Available |
| Trna-gln | Not Available | Not Available | Positive | 4844864 - 4844938 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 4844987 - 4845063 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





