Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472147_04707 | Not Available | Positive | 4788309 - 4788539 | 8263.88 |
| uncharacterised protein | SAMEA3472147_04708 | Not Available | Positive | 4788649 - 4789089 | 16279.8 |
| spermidine/putrescine abc transporter membrane protein | SAMEA3472147_04709 | Not Available | Negative | 4789177 - 4790040 | 32412.4 |
| spermidine/putrescine abc transporter atp-binding protein | SAMEA3472147_04710 | Not Available | Negative | 4790024 - 4791160 | 43030.8 |
| peptidase t | SAMEA3472147_04711 | Not Available | Positive | 4791410 - 4792639 | 44999.1 |
| cupin superfamily protein family | SAMEA3472147_04712 | Not Available | Negative | 4792785 - 4793906 | 42600.3 |
| two-component sensor kinase | SAMEA3472147_04713 | Not Available | Negative | 4793982 - 4795442 | 55318.8 |
| two-component response regulator | SAMEA3472147_04714 | Not Available | Negative | 4795442 - 4796113 | 25536.7 |
| adenylosuccinate lyase | SAMEA3472147_04715 | Not Available | Negative | 4796281 - 4797651 | 51572.7 |
| putative lysogenization regulator | SAMEA3472147_04716 | Not Available | Negative | 4797655 - 4798296 | 22949.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





