Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacteriophage integrase | SAMEA3472147_04697 | Not Available | Negative | 4770097 - 4770771 | 25097.3 |
| Trna-asn | Not Available | Not Available | Positive | 4770933 - 4771008 | Not Available |
| dgsa anti-repressor mtfa | SAMEA3472147_04699 | Not Available | Negative | 4771109 - 4771906 | 30280.7 |
| Trna-ser | Not Available | Not Available | Positive | 4772000 - 4772089 | Not Available |
| cytochrome | SAMEA3472147_04701 | Not Available | Negative | 4772660 - 4773190 | 20319.3 |
| putative invasin | SAMEA3472147_04702 | Not Available | Positive | 4774134 - 4781642 | 262930.0 |
| adp-heptose--lps heptosyltransferase-like protein | SAMEA3472147_04703 | Not Available | Negative | 4782665 - 4783717 | 39511.4 |
| shikimate transporter | SAMEA3472147_04704 | Not Available | Positive | 4784032 - 4785348 | 47800.1 |
| amp nucleosidase | SAMEA3472147_04705 | Not Available | Positive | 4785450 - 4786904 | 53997.9 |
| putative cytoplasmic protein | SAMEA3472147_04706 | Not Available | Positive | 4787247 - 4787963 | 25868.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





