Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase-4 subunit g | SAMEA3472147_00113 | Not Available | Positive | 113914 - 115629 | 65035.0 |
| hydrogenase-4 component h | SAMEA3472147_00114 | Not Available | Positive | 115639 - 116184 | 20100.4 |
| hydrogenase-4 subunit i | SAMEA3472147_00115 | Not Available | Positive | 116181 - 116939 | 28100.9 |
| protein processing element | SAMEA3472147_00116 | Not Available | Positive | 116932 - 117345 | 15607.9 |
| 2-component regulator | SAMEA3472147_00117 | Not Available | Positive | 117375 - 119387 | 75354.7 |
| formate transporter focb | SAMEA3472147_00118 | Not Available | Positive | 119409 - 120257 | 30550.3 |
| putative permease | SAMEA3472147_00119 | Not Available | Negative | 120295 - 121356 | 39210.9 |
| putative peptidase | SAMEA3472147_00120 | Not Available | Positive | 121569 - 123032 | 53911.1 |
| putative glutaredoxin | SAMEA3472147_00121 | Not Available | Positive | 123053 - 123412 | 13417.4 |
| dnaa family protein hda | SAMEA3472147_00122 | Not Available | Negative | 123550 - 124296 | 28371.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





