Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptide abc transporter atp-binding protein | SAMEA3472147_04675 | Not Available | Negative | 4748924 - 4749907 | 35846.5 |
| dipeptide abc transporter permease | SAMEA3472147_04676 | Not Available | Negative | 4749918 - 4750820 | 32310.5 |
| dipeptide transporter permease dppb | SAMEA3472147_04677 | Not Available | Negative | 4750830 - 4751849 | 37481.4 |
| dipeptide abc transporter, substrate-binding protein | SAMEA3472147_04678 | Not Available | Negative | 4752000 - 4753607 | 60314.9 |
| Trna-pro | Not Available | Not Available | Positive | 4754351 - 4754427 | Not Available |
| phosphoethanolamine transferase | SAMEA3472147_04680 | Not Available | Negative | 4754519 - 4756210 | 63808.0 |
| protein lpfe | SAMEA3472147_04681 | Not Available | Negative | 4756465 - 4756995 | 18466.7 |
| protein lpfd | SAMEA3472147_04682 | Not Available | Negative | 4757000 - 4757602 | 21087.2 |
| uncharacterised protein | SAMEA3472147_04683 | Not Available | Negative | 4758106 - 4759374 | 48014.3 |
| uncharacterised protein | SAMEA3472147_04684 | Not Available | Negative | 4759346 - 4759642 | 12034.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





