Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid sos inhibition protein a | SAMEA3472147_04601 | Not Available | Negative | 4691581 - 4692114 | 20666.6 |
| surface exclusion inner membrane protein tras | SAMEA3472147_04625 | Not Available | Negative | 4709367 - 4709861 | 18997.1 |
| conjugative transfer protein | SAMEA3472147_04626 | Not Available | Negative | 4709882 - 4712725 | 103724.0 |
| conjugal transfer protein trah | SAMEA3472147_04627 | Not Available | Negative | 4712722 - 4714095 | 50238.3 |
| conjugal transfer protein trbf | SAMEA3472147_04628 | Not Available | Negative | 4714082 - 4714474 | 15265.8 |
| conjugal transfer protein trbj | SAMEA3472147_04629 | Not Available | Negative | 4714461 - 4714742 | 10191.4 |
| incf transfer protein trbb | SAMEA3472147_04630 | Not Available | Negative | 4714732 - 4715277 | 19802.9 |
| conjugative transfer protein | SAMEA3472147_04631 | Not Available | Negative | 4715264 - 4715545 | 10813.4 |
| uncharacterised protein | SAMEA3472147_04632 | Not Available | Positive | 4715602 - 4716747 | 43938.4 |
| uncharacterised protein | SAMEA3472147_04633 | Not Available | Negative | 4716674 - 4717075 | 15776.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





